Butyrivibrio proteoclasticus B316

Gram-positiveRodNon-motileAnaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Butyrivibrio

Description

Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) is an anaerobic, polysaccharide-degrading, butyrate-forming rumen, Gram-positive bacterium isolated from the bovine rumen and with a key role in plant polysaccharide degradation. The 4.4Mb genome consists of 4 replicons; a chromosome, a chromid and two megaplasmids. The chromid is the smallest reported for all bacteria, and the first identified from the phylum Firmicutes. B. proteoclasticus devotes a large proportion of its genome to the breakdown and reassembly of complex polysaccharides and has a highly developed glycobiome when compared to other sequenced bacteria. The secretion of a range of polysaccharide-degrading enzymes which initiate the breakdown of pectin, starch and xylan, a subtilisin family protease active against plant proteins, and diverse intracellular enzymes to break down oligosaccharides constitute the degradative capability of this organism. A prominent feature of B. proteoclasticus is the presence of multiple gene clusters predicted to be involved in polysaccharide biosynthesis. Metabolic reconstruction reveals the absence of an identifiable gene for enolase, a conserved enzyme of the glycolytic pathway. This is the first report of an organism lacking an enolase. (Adapted from PMID: 20689770). (EBI Integr8)

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusButyrivibrio
SpeciesButyrivibrio proteoclasticus
StrainB316

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Butyrivibrio proteoclasticus B316
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Butyrivibrio proteoclasticus B316 plasmid pCY186, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
polysaccharide deacetylase family proteinBPR_RS04885Q8DP63Positive1169521 - 117050136986.4
polymer-forming cytoskeletal proteinBPR_RS04890Not AvailablePositive1170535 - 117156936553.2
ump kinaseBPR_RS04895A3DE57Positive1171590 - 117228825469.6
ribosome recycling factorBPR_RS04900A9KMX5Positive1172304 - 117285520932.1
isoprenyl transferaseBPR_RS04905Q8UFL9Positive1173066 - 117378827169.3
phosphatidate cytidylyltransferaseBPR_RS04910O31752Positive1173804 - 117462830402.5
1-deoxy-d-xylulose-5-phosphate reductoisomeraseBPR_RS04915C4Z5K1Positive1174750 - 117589241756.7
rip metalloprotease rsepBPR_RS04920O31754Positive1175927 - 117697939047.9
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseBPR_RS04925B8I6E1Positive1176990 - 117805437590.9
polc-type dna polymerase iiiBPR_RS04930Q8XJR3Positive1178121 - 1182710172342.0

Displaying genes 1181 – 1190 of 3493 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.