Dyella marensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Dyella

Description

Dyella marensis is a Gram-negative, rod-shaped bacterium that exhibits an aerobic metabolism, thriving optimally at a temperature of 32.0°C. This species belongs to the broader class of bacteria characterized by their rod-like morphology and oxygen-dependent respiration, which suggests a potential adaptability to environments with sufficient oxygen availability. The Gram-negative nature of Dyella marensis indicates the presence of a thin peptidoglycan layer surrounded by an outer membrane, a feature that typically confers resistance to certain antibiotics and influences its interaction with the surrounding environment. The optimal growth temperature of 32.0°C suggests that Dyella marensis may inhabit moderate thermal niches, which could include various aquatic environments or soils where temperatures remain stable. Given its aerobic requirement, Dyella marensis likely plays a role in biogeochemical cycles, particularly those involving carbon and nitrogen, as aerobic bacteria are essential for the degradation of organic matter and nutrient cycling in ecosystems. This bacterium's metabolic characteristics may also suggest potential applications in bioremediation strategies, where aerobic microorganisms are employed to degrade pollutants in oxygen-rich environments. Thus, Dyella marensis exemplifies a group of microorganisms that contribute significantly to ecosystem dynamics and nutrient recycling processes in their respective habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusDyella
SpeciesDyella marensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dyella marensis strain UNC178MFTsu3.1 genome assembly, contig:

Gene Summary

Adenine Count

817704 bp

Thymine Count

823699 bp

Guanine Count

1687148 bp

Cytosine Count

1676076 bp

Genome Length

5005584 bp

Protein-coding Genes

4271 genes

Non-Coding Genes

121 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cubico group peptidase, beta-lactamase class c familySAMN02799615_02770Not AvailableNegative3134471 - 313601256569.5
membrane dipeptidaseSAMN02799615_02771Not AvailableNegative3135996 - 313720443492.2
diaminopimelate decarboxylaseSAMN02799615_02772Not AvailableNegative3137201 - 313848146327.5
tonb-dependent receptor plug domainSAMN02799615_02773Not AvailableNegative3138693 - 3141698110406.0
transglutaminase-like enzyme, putative cysteine proteaseSAMN02799615_02774Not AvailableNegative3141749 - 314326656069.2
uncharacterized membrane proteinSAMN02799615_02775Not AvailablePositive3143428 - 314457640411.9
cell wall-associated hydrolase, nlpc familySAMN02799615_02776Not AvailablePositive3144608 - 314600251213.6
o-succinylbenzoate synthaseSAMN02799615_02777Not AvailablePositive3146039 - 314713639428.9
transcriptional regulator, rpir familySAMN02799615_02778Not AvailablePositive3147147 - 314802231534.9
l,d-peptidoglycan transpeptidase ykud, erfk/ybis/ycfs/ynhg familySAMN02799615_02779Not AvailablePositive3148046 - 314883728498.6

Displaying genes 2801 – 2810 of 4392 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.