Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, iclr family | SAMN05216266_102124 | Not Available | Negative | 979088 - 979891 | 28751.2 |
| 4-carboxymuconolactone decarboxylase | SAMN05216266_102125 | Not Available | Negative | 979901 - 980305 | 14384.9 |
| 3-oxoadipate enol-lactonase | SAMN05216266_102126 | Not Available | Negative | 980298 - 981095 | 28164.6 |
| 3-carboxy-cis,cis-muconate cycloisomerase | SAMN05216266_102127 | Not Available | Negative | 981092 - 982447 | 46922.1 |
| protocatechuate 3,4-dioxygenase alpha subunit | SAMN05216266_102128 | Not Available | Negative | 982555 - 983100 | 19503.6 |
| protocatechuate 3,4-dioxygenase beta subunit | SAMN05216266_102129 | Not Available | Negative | 983097 - 983831 | 27710.5 |
| acetyl-coa acetyltransferases | SAMN05216266_102130 | Not Available | Negative | 983851 - 985026 | 40128.5 |
| glutaconate coa-transferase subunit b | SAMN05216266_102131 | Not Available | Negative | 985026 - 985784 | 26778.9 |
| glutaconate coa-transferase subunit a | SAMN05216266_102132 | Not Available | Negative | 985781 - 986608 | 29693.3 |
| glyoxylate reductase | SAMN05216266_102133 | Not Available | Positive | 986757 - 987743 | 34735.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
