Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase i | SAMN05216266_10284 | Not Available | Negative | 939799 - 940707 | 32769.6 |
| large subunit ribosomal protein l19 | SAMN05216266_10285 | Not Available | Negative | 940798 - 941157 | 13570.4 |
| trna (guanine37-n1)-methyltransferase | SAMN05216266_10286 | Not Available | Negative | 941309 - 942073 | 27885.2 |
| 16s rrna processing protein rimm | SAMN05216266_10287 | Not Available | Negative | 942082 - 942666 | 20440.1 |
| hypothetical protein | SAMN05216266_10288 | Not Available | Negative | 942689 - 942928 | 8574.34 |
| small subunit ribosomal protein s16 | SAMN05216266_10289 | Not Available | Negative | 942925 - 943410 | 17592.8 |
| hypothetical protein | SAMN05216266_10290 | Not Available | Negative | 943619 - 944428 | 28607.2 |
| hypothetical protein | SAMN05216266_10291 | Not Available | Negative | 944488 - 945234 | 26105.4 |
| imidazolonepropionase | SAMN05216266_10292 | Not Available | Negative | 945329 - 946396 | 37430.6 |
| signal recognition particle subunit ffh/srp54 (srp54) | SAMN05216266_10293 | Not Available | Negative | 946398 - 947963 | 55279.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
