Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMN05216266_10244 | Not Available | Negative | 896162 - 897418 | 43669.0 |
| protein of unknown function | SAMN05216266_10245 | Not Available | Positive | 897498 - 897767 | 9890.95 |
| long-chain acyl-coa synthetase | SAMN05216266_10246 | Not Available | Negative | 898102 - 899787 | 60204.0 |
| hypothetical protein | SAMN05216266_10247 | Not Available | Negative | 899784 - 899873 | 3051.68 |
| 5,10-methylenetetrahydromethanopterin reductase | SAMN05216266_10248 | Not Available | Negative | 900063 - 901034 | 34671.2 |
| methyltransferase domain-containing protein | SAMN05216266_10249 | Not Available | Positive | 901250 - 902104 | 31448.0 |
| arsenate reductase | SAMN05216266_10250 | Not Available | Negative | 902142 - 902504 | 13221.7 |
| hypothetical protein | SAMN05216266_10251 | Not Available | Positive | 902722 - 903846 | 40815.8 |
| homoserine o-acetyltransferase | SAMN05216266_10252 | Not Available | Negative | 903869 - 905011 | 39851.6 |
| o-acetylhomoserine (thiol)-lyase | SAMN05216266_10253 | Not Available | Negative | 905008 - 906318 | 46679.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
