Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | SAMN05216266_1022 | Not Available | Positive | 845760 - 846188 | 15758.7 |
| trypsin | SAMN05216266_1023 | Not Available | Negative | 846369 - 847856 | 50966.1 |
| d-amino-acid dehydrogenase | SAMN05216266_1024 | Not Available | Positive | 848027 - 849142 | 37824.2 |
| hypothetical protein | SAMN05216266_1025 | Not Available | Negative | 849129 - 849935 | 28251.9 |
| prolyl-trna synthetase | SAMN05216266_1026 | Not Available | Positive | 850037 - 851785 | 63389.3 |
| phosphoglycolate phosphatase, had superfamily | SAMN05216266_1027 | Not Available | Negative | 851796 - 852497 | 24735.7 |
| hypothetical protein | SAMN05216266_1028 | Not Available | Positive | 852623 - 853687 | 35713.6 |
| secondary thiamine-phosphate synthase enzyme | SAMN05216266_1029 | Not Available | Negative | 853705 - 854115 | 14707.3 |
| ferredoxin | SAMN05216266_10210 | Not Available | Positive | 854279 - 854491 | 7628.23 |
| cytochrome p450 | SAMN05216266_10211 | Not Available | Positive | 854625 - 855806 | 43788.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
