Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted zn-dependent protease, minimal metalloprotease (mmp)-like domain | SAMN05216266_101835 | Not Available | Negative | 837271 - 837621 | 13051.6 |
| septum formation | SAMN05216266_101836 | Not Available | Negative | 837628 - 838614 | 35209.2 |
| hypothetical protein | SAMN05216266_101837 | Not Available | Positive | 838773 - 839372 | 20837.1 |
| glutathionylspermidine synthase | SAMN05216266_101838 | Not Available | Positive | 839373 - 840539 | 44151.6 |
| uncharacterized membrane protein yjfl, upf0719 family | SAMN05216266_101839 | Not Available | Positive | 840601 - 841050 | 15637.6 |
| haloalkane dehalogenase | SAMN05216266_101840 | Not Available | Positive | 841114 - 842121 | 36449.3 |
| seryl-trna synthetase | SAMN05216266_101841 | Not Available | Positive | 842156 - 843421 | 46743.1 |
| protein of unknown function | SAMN05216266_101842 | Not Available | Positive | 843534 - 844058 | 18489.1 |
| hypothetical protein | SAMN05216266_101843 | Not Available | Negative | 844069 - 844488 | 15083.3 |
| transcriptional regulator, arac family | SAMN05216266_1021 | Not Available | Negative | 844692 - 845678 | 35415.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
