Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216266_101825 | Not Available | Negative | 829346 - 829762 | 14071.8 |
| predicted arabinose efflux permease, mfs family | SAMN05216266_101826 | Not Available | Negative | 829836 - 831095 | 43823.3 |
| uncharacterized conserved protein, duf2252 family | SAMN05216266_101827 | Not Available | Negative | 831253 - 832602 | 50364.0 |
| uncharacterized conserved protein | SAMN05216266_101828 | Not Available | Positive | 832739 - 833092 | 12675.0 |
| rna polymerase, sigma subunit, ecf family | SAMN05216266_101829 | Not Available | Positive | 833089 - 834297 | 44101.1 |
| protein of unknown function | SAMN05216266_101830 | Not Available | Negative | 834502 - 834693 | 6679.7 |
| helix-turn-helix domain-containing protein | SAMN05216266_101831 | Not Available | Negative | 834711 - 835580 | 32542.1 |
| hypothetical protein | SAMN05216266_101832 | Not Available | Negative | 835650 - 836015 | 14011.7 |
| pin domain-containing protein | SAMN05216266_101833 | Not Available | Negative | 836055 - 836651 | 22295.2 |
| dna binding domain-containing protein, excisionase family | SAMN05216266_101834 | Not Available | Negative | 836701 - 837132 | 15551.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
