Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconate:h+ symporter, gntp family | SAMN05216266_101805 | Not Available | Negative | 808274 - 809707 | 48880.1 |
| hypothetical protein | SAMN05216266_101806 | Not Available | Negative | 809824 - 810693 | 32750.2 |
| hypothetical protein | SAMN05216266_101807 | Not Available | Negative | 810736 - 811224 | 18077.9 |
| endonuclease yncb, thermonuclease family | SAMN05216266_101808 | Not Available | Negative | 811242 - 812039 | 27431.1 |
| dna polymerase-3 subunit epsilon | SAMN05216266_101809 | Not Available | Positive | 812326 - 813876 | 54701.2 |
| beta protein | SAMN05216266_101810 | Not Available | Positive | 814070 - 814891 | 29319.4 |
| ntp pyrophosphatase, house-cleaning of non-canonical ntps | SAMN05216266_101811 | Not Available | Negative | 814896 - 815240 | 12808.2 |
| aaa domain-containing protein | SAMN05216266_101812 | Not Available | Positive | 815364 - 818237 | 101679.0 |
| hypothetical protein | SAMN05216266_101813 | Not Available | Positive | 818424 - 819695 | 45894.2 |
| nadph:quinone reductase | SAMN05216266_101814 | Not Available | Positive | 819868 - 820797 | 32159.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
