Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase) | SAMN05216266_101795 | Not Available | Negative | 800293 - 801798 | 54645.8 |
| pasta domain-containing protein | SAMN05216266_101796 | Not Available | Positive | 801943 - 802386 | 14891.5 |
| hypothetical protein | SAMN05216266_101797 | Not Available | Negative | 802391 - 802900 | 18927.8 |
| alpha/beta hydrolase | SAMN05216266_101798 | Not Available | Negative | 802927 - 804540 | 56711.3 |
| hypothetical protein | SAMN05216266_101799 | Not Available | Negative | 804547 - 804855 | 10550.0 |
| hypothetical protein | SAMN05216266_101800 | Not Available | Negative | 804831 - 804950 | 4119.6 |
| pqq-like domain-containing protein | SAMN05216266_101801 | Not Available | Negative | 804973 - 806739 | 62687.5 |
| hypothetical protein | SAMN05216266_101802 | Not Available | Positive | 806917 - 807108 | 6947.14 |
| protein of unknown function | SAMN05216266_101803 | Not Available | Positive | 807218 - 807553 | 12967.4 |
| transcriptional regulator, gntr family | SAMN05216266_101804 | Not Available | Positive | 807580 - 808281 | 25374.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
