Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216266_101785 | Not Available | Positive | 787748 - 788071 | 11819.2 |
| hypothetical protein | SAMN05216266_101786 | Not Available | Positive | 788168 - 788551 | 14479.0 |
| 6-o-methylguanine dna methyltransferase, dna binding domain | SAMN05216266_101787 | Not Available | Positive | 788819 - 791359 | 94930.9 |
| excalibur calcium-binding domain-containing protein | SAMN05216266_101788 | Not Available | Positive | 791640 - 792569 | 32103.4 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN05216266_101789 | Not Available | Negative | 792570 - 793916 | 47544.6 |
| methylmalonate-semialdehyde dehydrogenase | SAMN05216266_101790 | Not Available | Positive | 793956 - 795467 | 53177.2 |
| taurine---2-oxoglutarate transaminase | SAMN05216266_101791 | Not Available | Positive | 795502 - 796872 | 49272.3 |
| hypothetical protein | SAMN05216266_101792 | Not Available | Positive | 796892 - 798511 | 57600.1 |
| rna polymerase, sigma subunit, ecf family | SAMN05216266_101793 | Not Available | Negative | 798520 - 799572 | 38514.8 |
| dihydrofolate reductase | SAMN05216266_101794 | Not Available | Positive | 799690 - 800277 | 21000.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
