Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dgqhr domain-containing protein | SAMN05216266_101775 | Not Available | Negative | 773456 - 774685 | 45084.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216266_101776 | Not Available | Negative | 774694 - 775290 | 21374.5 |
| hypothetical protein | SAMN05216266_101777 | Not Available | Negative | 775364 - 775738 | 13351.1 |
| aaa domain-containing protein | SAMN05216266_101778 | Not Available | Negative | 775735 - 778188 | 89005.4 |
| hypothetical protein | SAMN05216266_101779 | Not Available | Positive | 778351 - 780411 | 74909.8 |
| type i restriction enzyme m protein | SAMN05216266_101780 | Not Available | Positive | 780423 - 782021 | 59661.5 |
| type i restriction enzyme, s subunit | SAMN05216266_101781 | Not Available | Positive | 782014 - 783108 | 39419.1 |
| type i restriction enzyme, r subunit | SAMN05216266_101782 | Not Available | Positive | 783105 - 786287 | 118468.0 |
| protein of unknown function | SAMN05216266_101783 | Not Available | Negative | 786284 - 786511 | 8110.61 |
| helix-turn-helix domain-containing protein | SAMN05216266_101784 | Not Available | Negative | 786475 - 787359 | 33018.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
