Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, duf952 family | SAMN05216266_101735 | Not Available | Positive | 731082 - 731435 | 12683.2 |
| rna polymerase sigma-70 factor, sigma-e family | SAMN05216266_101736 | Not Available | Positive | 731500 - 732006 | 18618.1 |
| hypothetical protein | SAMN05216266_101737 | Not Available | Positive | 732003 - 732833 | 27798.1 |
| ferritin | SAMN05216266_101738 | Not Available | Negative | 733064 - 733615 | 20859.6 |
| arginine deiminase | SAMN05216266_101739 | Not Available | Negative | 733815 - 735143 | 46996.8 |
| electron transfer dm13 | SAMN05216266_101740 | Not Available | Positive | 735177 - 735674 | 17699.9 |
| caax protease self-immunity | SAMN05216266_101741 | Not Available | Negative | 735688 - 736575 | 32775.6 |
| choline/glycine/proline betaine transport protein | SAMN05216266_101742 | Not Available | Positive | 736687 - 738381 | 60373.6 |
| ppox class probable f420-dependent enzyme | SAMN05216266_101743 | Not Available | Positive | 738488 - 738955 | 17578.9 |
| protein of unknown function | SAMN05216266_101744 | Not Available | Negative | 738965 - 739750 | 28636.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
