Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mrna interferase mazf | SAMN05216266_101695 | Not Available | Negative | 695044 - 695343 | 10694.1 |
| hypothetical protein | SAMN05216266_101696 | Not Available | Negative | 695343 - 695579 | 8658.16 |
| hypothetical protein | SAMN05216266_101697 | Not Available | Negative | 695660 - 695977 | 11291.0 |
| snoal-like polyketide cyclase | SAMN05216266_101698 | Not Available | Negative | 696054 - 696416 | 13423.7 |
| uncharacterized conserved protein phnb, glyoxalase superfamily | SAMN05216266_101699 | Not Available | Negative | 696416 - 697321 | 32598.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216266_101700 | Not Available | Negative | 697314 - 697934 | 22943.9 |
| hypothetical protein | SAMN05216266_101701 | Not Available | Negative | 697931 - 698275 | 13397.1 |
| helix-turn-helix domain-containing protein | SAMN05216266_101702 | Not Available | Positive | 698387 - 699223 | 32076.3 |
| protein of unknown function | SAMN05216266_101703 | Not Available | Positive | 699246 - 699437 | 6635.76 |
| catechol 2,3-dioxygenase | SAMN05216266_101704 | Not Available | Negative | 699449 - 699856 | 14451.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
