Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system permease protein | SAMN05216266_101655 | Not Available | Positive | 655128 - 655961 | 29227.6 |
| abc-type dipeptide/oligopeptide/nickel transport system, atpase component | SAMN05216266_101656 | Not Available | Positive | 655958 - 656740 | 27660.6 |
| peptide/nickel transport system atp-binding protein | SAMN05216266_101657 | Not Available | Positive | 656737 - 657546 | 29899.9 |
| acyl-coa reductase | SAMN05216266_101658 | Not Available | Positive | 657546 - 658988 | 49972.9 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05216266_101659 | Not Available | Positive | 658985 - 659761 | 26728.7 |
| aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | SAMN05216266_101660 | Not Available | Positive | 659772 - 661154 | 48290.5 |
| citrate lyase subunit beta / citryl-coa lyase | SAMN05216266_101661 | Not Available | Negative | 661239 - 662120 | 31720.8 |
| beta-methylmalyl-coa/l-malyl-coa lyase | SAMN05216266_101662 | Not Available | Negative | 662113 - 663249 | 40849.9 |
| predicted arabinose efflux permease, mfs family | SAMN05216266_101663 | Not Available | Negative | 663287 - 664483 | 41292.0 |
| transcriptional regulator, tetr family | SAMN05216266_101664 | Not Available | Negative | 664564 - 665160 | 21562.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
