Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase a (cyclophilin a) | SAMN05216266_101625 | Not Available | Positive | 622399 - 622959 | 19915.1 |
| membrane associated serine protease, rhomboid family | SAMN05216266_101626 | Not Available | Positive | 623140 - 624099 | 34351.5 |
| ph domain-containing protein | SAMN05216266_101627 | Not Available | Negative | 624131 - 624547 | 14539.5 |
| uncharacterised protein family (upf0233) | SAMN05216266_101628 | Not Available | Negative | 624632 - 624898 | 9967.73 |
| lpxtg-site transpeptidase (sortase) family protein | SAMN05216266_101629 | Not Available | Positive | 625087 - 626127 | 37663.5 |
| hypothetical protein | SAMN05216266_101630 | Not Available | Positive | 626127 - 626282 | 5777.39 |
| flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase) | SAMN05216266_101631 | Not Available | Positive | 626279 - 627325 | 36661.8 |
| hypothetical protein | SAMN05216266_101632 | Not Available | Negative | 627294 - 627695 | 14670.2 |
| ferredoxin--nadp+ reductase | SAMN05216266_101633 | Not Available | Negative | 627846 - 629234 | 50563.7 |
| para-aminobenzoate synthetase component 2 | SAMN05216266_101634 | Not Available | Positive | 629409 - 630044 | 22462.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
