Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna (cytosine-5)-methyltransferase 1 | SAMN05216266_101605 | Not Available | Positive | 604634 - 605881 | 46584.1 |
| t/g mismatch-specific endonuclease | SAMN05216266_101606 | Not Available | Positive | 606292 - 606672 | 14557.3 |
| eco29ki restriction endonuclease | SAMN05216266_101607 | Not Available | Positive | 606750 - 607490 | 27742.8 |
| protein of unknown function duf262 | SAMN05216266_101608 | Not Available | Negative | 607572 - 608738 | 44852.2 |
| frg domain-containing protein | SAMN05216266_101609 | Not Available | Negative | 608731 - 609510 | 29273.3 |
| hypothetical protein | SAMN05216266_101610 | Not Available | Positive | 610351 - 611115 | 28026.3 |
| snoal-like domain-containing protein | SAMN05216266_101611 | Not Available | Negative | 611396 - 611749 | 12536.7 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05216266_101612 | Not Available | Positive | 611811 - 612785 | 35286.3 |
| predicted dithiol-disulfide oxidoreductase, duf899 family | SAMN05216266_101613 | Not Available | Negative | 612790 - 613530 | 27843.4 |
| transcriptional regulator, hxlr family | SAMN05216266_101614 | Not Available | Positive | 613622 - 614101 | 17519.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
