Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| probable f420-dependent oxidoreductase, msmeg_2516 family | SAMN05216266_101485 | Not Available | Negative | 473389 - 474270 | 32372.7 |
| phosphoenolpyruvate carboxykinase (gtp) | SAMN05216266_101486 | Not Available | Negative | 474385 - 476208 | 67773.2 |
| hypothetical protein | SAMN05216266_101487 | Not Available | Negative | 476573 - 477283 | 24146.0 |
| dynamin family protein | SAMN05216266_101488 | Not Available | Negative | 477413 - 479251 | 66944.2 |
| grpe protein | SAMN05216266_101489 | Not Available | Negative | 479255 - 479770 | 17723.7 |
| dynamin family protein | SAMN05216266_101490 | Not Available | Negative | 479770 - 481353 | 55313.7 |
| signal transduction histidine kinase | SAMN05216266_101491 | Not Available | Positive | 481496 - 482662 | 41615.5 |
| two component transcriptional regulator, luxr family | SAMN05216266_101492 | Not Available | Positive | 482662 - 483393 | 25965.5 |
| hypothetical protein | SAMN05216266_101493 | Not Available | Positive | 483481 - 483966 | 17905.1 |
| phytoene dehydrogenase-related protein | SAMN05216266_101494 | Not Available | Positive | 483966 - 485384 | 49979.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
