Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinogalactan oligomer / maltooligosaccharide transport system permease protein | SAMN05216266_101434 | Not Available | Negative | 420457 - 421461 | 36031.5 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN05216266_101435 | Not Available | Negative | 421458 - 422756 | 45492.6 |
| alpha-amylase | SAMN05216266_101436 | Not Available | Negative | 422877 - 424319 | 51826.1 |
| hypothetical protein | SAMN05216266_101437 | Not Available | Positive | 424514 - 424960 | 16635.6 |
| hypothetical protein | SAMN05216266_101438 | Not Available | Negative | 425018 - 425656 | 24270.9 |
| amino acid abc transporter atp-binding protein, paat family | SAMN05216266_101439 | Not Available | Negative | 425663 - 426418 | 27320.2 |
| amino acid abc transporter membrane protein, paat family | SAMN05216266_101440 | Not Available | Negative | 426568 - 427377 | 29231.6 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05216266_101441 | Not Available | Negative | 427413 - 428234 | 29397.2 |
| uncharacterized conserved protein, circularly permuted atpgrasp superfamily | SAMN05216266_101442 | Not Available | Positive | 428673 - 430322 | 60087.5 |
| uncharacterized conserved protein, alpha-e superfamily | SAMN05216266_101443 | Not Available | Positive | 430333 - 431280 | 35519.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
