Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine rich repeat-containing protein | SAMN05216266_101414 | Not Available | Positive | 401643 - 402428 | 29474.4 |
| hypothetical protein | SAMN05216266_101415 | Not Available | Negative | 402442 - 402837 | 13416.8 |
| vancomycin resistance protein yoar, contains peptidoglycan-binding and vanw domains | SAMN05216266_101416 | Not Available | Negative | 402938 - 404863 | 68211.2 |
| chaperonin groes | SAMN05216266_101417 | Not Available | Negative | 404885 - 405196 | 11617.9 |
| thiol-disulfide isomerase or thioredoxin | SAMN05216266_101418 | Not Available | Negative | 405247 - 407103 | 65588.3 |
| methyltransferase domain-containing protein | SAMN05216266_101419 | Not Available | Positive | 407239 - 408048 | 29783.3 |
| hypothetical protein | SAMN05216266_101420 | Not Available | Negative | 408139 - 408318 | 6117.33 |
| polyketide cyclase / dehydrase and lipid transport | SAMN05216266_101421 | Not Available | Negative | 408474 - 408938 | 17078.8 |
| hypothetical protein | SAMN05216266_101422 | Not Available | Negative | 408977 - 411340 | 86864.5 |
| hypothetical protein | SAMN05216266_101423 | Not Available | Positive | 411634 - 412158 | 18162.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
