Amycolatopsis marina

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis marina is a Gram-positive bacterium that demonstrates aerobic metabolism and thrives optimally at a temperature of 29.0°C. This microbial species belongs to the genus Amycolatopsis, which is known for its ability to produce various bioactive compounds. As a member of the Actinobacteria phylum, A. marina exhibits the characteristic high G+C content in its DNA, which is a hallmark of many actinobacteria and is often associated with their complex secondary metabolite production. The aerobic nature of A. marina indicates that it relies on oxygen for its growth and metabolic processes, which may influence its ecological niches and interactions with other microorganisms in its environment. Given its optimal growth temperature, A. marina may be well-suited to marine or estuarine environments where temperatures are moderate and the presence of oxygen is abundant. Furthermore, the ability of A. marina to thrive in oxygen-rich conditions suggests potential roles in biogeochemical cycles, particularly in nutrient cycling within aquatic ecosystems. The ecological implications of its metabolic activities could contribute to the breakdown of organic matter or the production of compounds that influence microbial community dynamics in marine habitats, highlighting the importance of this bacterium in maintaining ecological balance.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis marina
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis marina strain CGMCC 4.3568 genome assembly, contig:

Gene Summary

Adenine Count

1120190 bp

Thymine Count

1110911 bp

Guanine Count

2383839 bp

Cytosine Count

2405654 bp

Genome Length

7020699 bp

Protein-coding Genes

6665 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mfs transporter, dha2 family, multidrug resistance proteinSAMN05216266_101394Not AvailablePositive385314 - 38671147645.2
hypothetical proteinSAMN05216266_101395Not AvailablePositive387064 - 38747414776.4
hemerythrin hhe cation binding domain-containing proteinSAMN05216266_101396Not AvailablePositive387522 - 38801618085.3
hypothetical proteinSAMN05216266_101397Not AvailablePositive388130 - 38892428930.9
methyltransferase domain-containing proteinSAMN05216266_101398Not AvailableNegative388937 - 38968326958.6
pimeloyl-acp methyl ester carboxylesteraseSAMN05216266_101399Not AvailablePositive389827 - 39068130605.0
predicted n-acetyltransferase yhbsSAMN05216266_101400Not AvailableNegative390699 - 39114216382.6
protein n-acetyltransferase, rimj/riml familySAMN05216266_101401Not AvailablePositive391217 - 39178021525.6
pyridoxamine 5'-phosphate oxidaseSAMN05216266_101402Not AvailableNegative391832 - 39246423234.5
hypothetical proteinSAMN05216266_101403Not AvailableNegative392472 - 39281912752.1

Displaying genes 401 – 410 of 1830 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.