Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, dha2 family, multidrug resistance protein | SAMN05216266_101394 | Not Available | Positive | 385314 - 386711 | 47645.2 |
| hypothetical protein | SAMN05216266_101395 | Not Available | Positive | 387064 - 387474 | 14776.4 |
| hemerythrin hhe cation binding domain-containing protein | SAMN05216266_101396 | Not Available | Positive | 387522 - 388016 | 18085.3 |
| hypothetical protein | SAMN05216266_101397 | Not Available | Positive | 388130 - 388924 | 28930.9 |
| methyltransferase domain-containing protein | SAMN05216266_101398 | Not Available | Negative | 388937 - 389683 | 26958.6 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05216266_101399 | Not Available | Positive | 389827 - 390681 | 30605.0 |
| predicted n-acetyltransferase yhbs | SAMN05216266_101400 | Not Available | Negative | 390699 - 391142 | 16382.6 |
| protein n-acetyltransferase, rimj/riml family | SAMN05216266_101401 | Not Available | Positive | 391217 - 391780 | 21525.6 |
| pyridoxamine 5'-phosphate oxidase | SAMN05216266_101402 | Not Available | Negative | 391832 - 392464 | 23234.5 |
| hypothetical protein | SAMN05216266_101403 | Not Available | Negative | 392472 - 392819 | 12752.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
