Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN05216266_101384 | Not Available | Positive | 376667 - 377263 | 21035.4 |
| putative acyl-coa dehydrogenase | SAMN05216266_101385 | Not Available | Positive | 377256 - 378929 | 60772.1 |
| enoyl-coa hydratase | SAMN05216266_101386 | Not Available | Positive | 378926 - 379774 | 30960.7 |
| enoyl-coa hydratase | SAMN05216266_101387 | Not Available | Positive | 379774 - 380547 | 26951.1 |
| hypothetical protein | SAMN05216266_101388 | Not Available | Positive | 380705 - 381160 | 15862.7 |
| uncharacterized conserved protein ykwd, contains cap (csp/antigen 5/pr1) domain | SAMN05216266_101389 | Not Available | Negative | 381185 - 382009 | 28827.1 |
| dctp deaminase | SAMN05216266_101390 | Not Available | Negative | 382095 - 382685 | 21643.6 |
| hypothetical protein | SAMN05216266_101391 | Not Available | Negative | 382708 - 383955 | 46042.1 |
| Trna-gly | Not Available | Not Available | Positive | 384086 - 384156 | Not Available |
| dna-binding transcriptional regulator, lysr family | SAMN05216266_101393 | Not Available | Negative | 384274 - 385182 | 32429.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
