Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide transport system atp-binding protein | SAMN05216266_101374 | Not Available | Negative | 366561 - 367571 | 36396.9 |
| peptide/nickel transport system atp-binding protein/oligopeptide transport system atp-binding protein | SAMN05216266_101375 | Not Available | Negative | 367564 - 368592 | 36536.1 |
| peptide/nickel transport system permease protein | SAMN05216266_101376 | Not Available | Negative | 368589 - 369524 | 33294.2 |
| peptide/nickel transport system permease protein | SAMN05216266_101377 | Not Available | Negative | 369521 - 370447 | 32560.6 |
| peptide/nickel transport system substrate-binding protein | SAMN05216266_101378 | Not Available | Negative | 370455 - 372020 | 55263.7 |
| alpha-ketoglutaric semialdehyde dehydrogenase/nadp-dependent aldehyde dehydrogenase | SAMN05216266_101379 | Not Available | Negative | 372017 - 373552 | 53575.4 |
| 5-dehydro-4-deoxyglucarate dehydratase | SAMN05216266_101380 | Not Available | Negative | 373549 - 374481 | 32871.5 |
| transcriptional regulator, iclr family | SAMN05216266_101381 | Not Available | Positive | 374582 - 375352 | 28088.7 |
| protein of unknown function | SAMN05216266_101382 | Not Available | Positive | 375488 - 375979 | 17626.9 |
| deazaflavin-dependent oxidoreductase, nitroreductase family | SAMN05216266_101383 | Not Available | Negative | 376163 - 376540 | 13905.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
