Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216266_101354 | Not Available | Negative | 348923 - 349297 | 12757.2 |
| acetyltransferase (gnat) family protein | SAMN05216266_101355 | Not Available | Negative | 349525 - 349953 | 16109.8 |
| udp-glucose 4-epimerase | SAMN05216266_101356 | Not Available | Positive | 350045 - 350992 | 33344.2 |
| glycosyl transferase family 2 | SAMN05216266_101357 | Not Available | Positive | 350989 - 353211 | 80634.5 |
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN05216266_101358 | Not Available | Negative | 353144 - 353632 | 17452.1 |
| methyltransferase domain-containing protein | SAMN05216266_101359 | Not Available | Negative | 353632 - 354363 | 26179.2 |
| udp-sulfoquinovose synthase | SAMN05216266_101360 | Not Available | Positive | 354498 - 355721 | 46087.9 |
| hypothetical protein | SAMN05216266_101361 | Not Available | Negative | 355760 - 356206 | 16282.4 |
| hypothetical protein | SAMN05216266_101362 | Not Available | Negative | 356203 - 356454 | 9435.24 |
| transcriptional regulator, tetr family | SAMN05216266_101363 | Not Available | Negative | 356496 - 357056 | 20538.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
