Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymethylenebutenolidase | SAMN05216266_101346 | Not Available | Positive | 339806 - 340504 | 24486.2 |
| choline/carnitine/betaine transport | SAMN05216266_101347 | Not Available | Positive | 340640 - 342343 | 61185.8 |
| merr family transcriptional regulator, heat shock protein hspr | SAMN05216266_101348 | Not Available | Negative | 342422 - 342865 | 16041.2 |
| molecular chaperone dnaj | SAMN05216266_101349 | Not Available | Negative | 342871 - 344058 | 41150.4 |
| molecular chaperone grpe | SAMN05216266_101350 | Not Available | Negative | 344080 - 344811 | 26097.0 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 345362 - 345478 | 18.01 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 345568 - 345690 | 18.01 |
| molecular chaperone dnak | SAMN05216266_101351 | Not Available | Negative | 344808 - 346688 | 66875.4 |
| putative adhesin | SAMN05216266_101352 | Not Available | Negative | 346857 - 347624 | 26394.3 |
| hypothetical protein | SAMN05216266_101353 | Not Available | Positive | 347814 - 348359 | 19060.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
