Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane-associated protein | SAMN05216266_101316 | Not Available | Positive | 313109 - 313804 | 25248.3 |
| glyoxylase i family protein | SAMN05216266_101317 | Not Available | Negative | 313810 - 314340 | 19584.2 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05216266_101318 | Not Available | Negative | 314431 - 315183 | 25748.6 |
| panthothenate kinase | SAMN05216266_101319 | Not Available | Negative | 315187 - 315822 | 23335.6 |
| sugar or nucleoside kinase, ribokinase family | SAMN05216266_101320 | Not Available | Negative | 315819 - 316670 | 29610.4 |
| transcriptional regulator, laci family | SAMN05216266_101321 | Not Available | Positive | 316793 - 317815 | 35753.8 |
| predicted alpha-1,6-mannanase, gh76 family | SAMN05216266_101322 | Not Available | Negative | 317890 - 318909 | 36672.5 |
| anaerobic selenocysteine-containing dehydrogenase | SAMN05216266_101323 | Not Available | Positive | 318965 - 321115 | 76072.8 |
| trna g18 (ribose-2'-o)-methylase spou | SAMN05216266_101324 | Not Available | Negative | 321209 - 321865 | 23884.9 |
| protein of unknown function | SAMN05216266_101325 | Not Available | Negative | 321888 - 322277 | 14324.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
