Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216266_101296 | Not Available | Positive | 294606 - 295010 | 13602.0 |
| hypothetical protein | SAMN05216266_101297 | Not Available | Negative | 295032 - 295574 | 18559.7 |
| glycolate oxidase | SAMN05216266_101298 | Not Available | Negative | 295621 - 297012 | 48454.3 |
| hypothetical protein | SAMN05216266_101299 | Not Available | Positive | 297152 - 297637 | 18189.9 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05216266_101300 | Not Available | Negative | 297664 - 298392 | 25996.6 |
| uncharacterized membrane protein | SAMN05216266_101301 | Not Available | Negative | 298497 - 299033 | 18746.7 |
| protein of unknown function | SAMN05216266_101302 | Not Available | Positive | 299145 - 299606 | 15918.8 |
| putative membrane protein | SAMN05216266_101303 | Not Available | Negative | 299720 - 300661 | 33180.0 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN05216266_101304 | Not Available | Negative | 300702 - 302207 | 51689.6 |
| transcriptional regulator, tetr family | SAMN05216266_101305 | Not Available | Positive | 302292 - 302816 | 18859.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
