Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidophosphoribosyltransferase | SAMN05216266_101236 | Not Available | Negative | 235905 - 237443 | 54133.2 |
| hypothetical protein | SAMN05216266_101237 | Not Available | Negative | 237623 - 238009 | 14067.7 |
| protein of unknown function | SAMN05216266_101238 | Not Available | Negative | 237993 - 238229 | 8373.92 |
| helix-turn-helix domain-containing protein | SAMN05216266_101239 | Not Available | Negative | 238429 - 239298 | 32697.3 |
| s-adenosyl methyltransferase | SAMN05216266_101240 | Not Available | Positive | 239541 - 240374 | 30387.9 |
| hypothetical protein | SAMN05216266_101241 | Not Available | Negative | 240383 - 240763 | 13596.2 |
| sseb protein n-terminal domain-containing protein | SAMN05216266_101242 | Not Available | Positive | 240839 - 241447 | 22455.9 |
| lyzozyme m1 (1,4-beta-n-acetylmuramidase), gh25 family | SAMN05216266_101243 | Not Available | Positive | 241602 - 242432 | 29238.4 |
| lyzozyme m1 (1,4-beta-n-acetylmuramidase), gh25 family | SAMN05216266_101244 | Not Available | Positive | 242641 - 243477 | 30501.3 |
| hypothetical protein | SAMN05216266_101245 | Not Available | Positive | 243706 - 244788 | 36857.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
