Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05216266_101206 | Not Available | Positive | 209398 - 209700 | 10075.7 |
| hypothetical protein | SAMN05216266_101207 | Not Available | Positive | 209941 - 210048 | 4036.09 |
| protein of unknown function | SAMN05216266_101208 | Not Available | Positive | 210051 - 210668 | 22534.5 |
| sensor histidine kinase inhibitor, kipi family | SAMN05216266_101209 | Not Available | Positive | 210681 - 211292 | 21581.7 |
| biotin-dependent carboxylase uncharacterized domain-containing protein | SAMN05216266_101210 | Not Available | Positive | 211289 - 212149 | 29041.9 |
| hypothetical protein | SAMN05216266_101211 | Not Available | Positive | 212152 - 212565 | 14950.0 |
| 4-amino-4-deoxychorismate lyase | SAMN05216266_101212 | Not Available | Negative | 212570 - 213475 | 32093.3 |
| hypothetical protein | SAMN05216266_101213 | Not Available | Positive | 213500 - 214627 | 40617.1 |
| hypothetical protein | SAMN05216266_101214 | Not Available | Positive | 214717 - 215283 | 20856.4 |
| asparaginase | SAMN05216266_101215 | Not Available | Positive | 215358 - 216380 | 35226.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
