Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative tim-barrel protein, nifr3 family | SAMN05216266_101186 | Not Available | Positive | 191153 - 192331 | 42349.6 |
| dihydrofolate reductase | SAMN05216266_101187 | Not Available | Positive | 192459 - 193085 | 22353.5 |
| uncharacterized conserved protein | SAMN05216266_101188 | Not Available | Positive | 193115 - 193453 | 11927.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216266_101189 | Not Available | Positive | 193458 - 194726 | 45545.7 |
| hypothetical protein | SAMN05216266_101190 | Not Available | Positive | 194790 - 195245 | 16341.8 |
| hypothetical protein | SAMN05216266_101191 | Not Available | Positive | 195337 - 195768 | 15319.1 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05216266_101192 | Not Available | Positive | 195878 - 196678 | 29544.0 |
| hypothetical protein | SAMN05216266_101193 | Not Available | Positive | 196671 - 197468 | 29733.7 |
| transcriptional attenuator, lytr family | SAMN05216266_101194 | Not Available | Positive | 197759 - 199213 | 52737.8 |
| phosphate uptake regulator, phou | SAMN05216266_101195 | Not Available | Positive | 199309 - 199974 | 24413.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
