Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, luxr family | SAMN05216266_101176 | Not Available | Negative | 183132 - 183743 | 21663.2 |
| two-component system, narl family, sensor histidine kinase desk | SAMN05216266_101177 | Not Available | Negative | 183740 - 184834 | 39430.0 |
| abc-2 type transport system permease protein | SAMN05216266_101178 | Not Available | Negative | 184831 - 185568 | 25641.8 |
| abc-2 type transport system atp-binding protein | SAMN05216266_101179 | Not Available | Negative | 185565 - 186464 | 31531.2 |
| v8-like glu-specific endopeptidase | SAMN05216266_101180 | Not Available | Positive | 186760 - 187683 | 31652.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216266_101181 | Not Available | Negative | 187779 - 188339 | 21284.4 |
| hypothetical protein | SAMN05216266_101182 | Not Available | Positive | 188604 - 188696 | 3495.39 |
| hypothetical protein | SAMN05216266_101183 | Not Available | Negative | 189023 - 189547 | 18794.2 |
| eama-like transporter family protein | SAMN05216266_101184 | Not Available | Negative | 189507 - 190436 | 32173.1 |
| superoxide dismutase, cu-zn family | SAMN05216266_101185 | Not Available | Positive | 190562 - 191134 | 19520.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
