Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase/4-guanidinobutyraldehyde dehydrogenase / nad-dependent aldehyde dehydrogenase | SAMN05216266_104189 | Not Available | Negative | 1843894 - 1845396 | 53403.2 |
| l-alanine-dl-glutamate epimerase | SAMN05216266_104190 | Not Available | Negative | 1845393 - 1846502 | 41305.5 |
| 5,6,7,8-tetrahydromethanopterin hydro-lyase | SAMN05216266_104191 | Not Available | Negative | 1846505 - 1847008 | 17484.6 |
| osmoprotectant transport system substrate-binding protein | SAMN05216266_104192 | Not Available | Negative | 1847005 - 1847940 | 33382.9 |
| osmoprotectant transport system permease protein | SAMN05216266_104193 | Not Available | Negative | 1847970 - 1848749 | 27146.3 |
| osmoprotectant transport system atp-binding protein | SAMN05216266_104194 | Not Available | Negative | 1848739 - 1849665 | 33770.9 |
| osmoprotectant transport system permease protein | SAMN05216266_104195 | Not Available | Negative | 1849802 - 1850449 | 22622.4 |
| transcriptional regulator, iclr family | SAMN05216266_104196 | Not Available | Positive | 1850643 - 1851329 | 24464.2 |
| Trna-thr | Not Available | Not Available | Positive | 1851420 - 1851495 | Not Available |
| uncharacterized membrane protein yjjp, duf1212 family | SAMN05216266_104198 | Not Available | Positive | 1851767 - 1853284 | 53110.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
