Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted oxidoreductase | SAMN05216266_104169 | Not Available | Negative | 1829326 - 1830345 | 36910.6 |
| transcriptional regulator, tetr family | SAMN05216266_104170 | Not Available | Positive | 1830504 - 1831091 | 20850.9 |
| hypothetical protein | SAMN05216266_104171 | Not Available | Negative | 1831117 - 1831434 | 11116.3 |
| transcriptional regulator, contains xre-family hth domain | SAMN05216266_104172 | Not Available | Positive | 1831507 - 1832172 | 24369.4 |
| hypothetical protein | SAMN05216266_104173 | Not Available | Positive | 1832172 - 1832381 | 7778.96 |
| protein of unknown function | SAMN05216266_104174 | Not Available | Positive | 1832368 - 1832655 | 10033.4 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05216266_104175 | Not Available | Negative | 1832639 - 1833379 | 27472.0 |
| helix-turn-helix domain-containing protein | SAMN05216266_104176 | Not Available | Negative | 1833406 - 1833939 | 19585.4 |
| hypothetical protein | SAMN05216266_104177 | Not Available | Negative | 1834075 - 1834326 | 8796.5 |
| hypothetical protein | SAMN05216266_104178 | Not Available | Negative | 1834571 - 1834867 | 10942.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
