Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing protein | SAMN05216266_104139 | Not Available | Positive | 1794246 - 1794989 | 27225.2 |
| adp-heptose:lps heptosyltransferase | SAMN05216266_104140 | Not Available | Negative | 1795029 - 1796162 | 40440.6 |
| rho termination factor, n-terminal domain | SAMN05216266_104141 | Not Available | Negative | 1796159 - 1796560 | 14730.1 |
| rfae bifunctional protein, domain i/rfae bifunctional protein, domain ii | SAMN05216266_104142 | Not Available | Positive | 1796745 - 1798277 | 54089.1 |
| glycosyl transferase family 2 | SAMN05216266_104143 | Not Available | Positive | 1798274 - 1799086 | 29376.7 |
| glucoamylase (glucan-1,4-alpha-glucosidase), gh15 family | SAMN05216266_104144 | Not Available | Negative | 1799133 - 1800959 | 68981.2 |
| short-chain dehydrogenase | SAMN05216266_104145 | Not Available | Positive | 1801136 - 1802149 | 36480.2 |
| atp-dependent dna helicase recq | SAMN05216266_104146 | Not Available | Positive | 1802231 - 1803889 | 60650.9 |
| protein of unknown function | SAMN05216266_104147 | Not Available | Negative | 1803930 - 1804400 | 16434.4 |
| acyl-coa dehydrogenase | SAMN05216266_104148 | Not Available | Negative | 1804730 - 1805848 | 39445.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
