Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase ib | SAMN05216266_104129 | Not Available | Positive | 1787899 - 1788954 | 39679.4 |
| protein of unknown function | SAMN05216266_104130 | Not Available | Negative | 1788969 - 1789232 | 9092.85 |
| protein of unknown function | SAMN05216266_104131 | Not Available | Negative | 1789229 - 1789552 | 11867.2 |
| putative holin-x, holin superfamily iii | SAMN05216266_104132 | Not Available | Negative | 1789549 - 1789968 | 14227.6 |
| hypothetical protein | SAMN05216266_104133 | Not Available | Positive | 1790103 - 1790699 | 20975.8 |
| bon domain-containing protein | SAMN05216266_104134 | Not Available | Positive | 1790761 - 1791480 | 26209.1 |
| hypothetical protein | SAMN05216266_104135 | Not Available | Positive | 1791765 - 1792046 | 10719.4 |
| voltage-gated potassium channel | SAMN05216266_104136 | Not Available | Negative | 1792187 - 1792903 | 26248.0 |
| d-sedoheptulose 7-phosphate isomerase | SAMN05216266_104137 | Not Available | Negative | 1792900 - 1793511 | 21105.1 |
| hypothetical protein | SAMN05216266_104138 | Not Available | Positive | 1793725 - 1794198 | 15866.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
