Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e | SAMN05216266_104119 | Not Available | Positive | 1779601 - 1780203 | 20549.6 |
| adp-heptose:lps heptosyltransferase | SAMN05216266_104120 | Not Available | Positive | 1780200 - 1781243 | 36208.3 |
| d-sedoheptulose 7-phosphate isomerase | SAMN05216266_104121 | Not Available | Positive | 1781240 - 1781803 | 19496.1 |
| rfae bifunctional protein, domain i/rfae bifunctional protein, domain ii | SAMN05216266_104122 | Not Available | Positive | 1781800 - 1783191 | 47478.6 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05216266_104123 | Not Available | Positive | 1783212 - 1783901 | 23613.0 |
| adp-heptose:lps heptosyltransferase | SAMN05216266_104124 | Not Available | Positive | 1783898 - 1784848 | 32378.6 |
| hypothetical protein | SAMN05216266_104125 | Not Available | Positive | 1785009 - 1785224 | 7612.57 |
| nucleoside-diphosphate-sugar epimerase | SAMN05216266_104126 | Not Available | Positive | 1785342 - 1786406 | 38438.3 |
| serine/threonine-protein kinase rsbw | SAMN05216266_104127 | Not Available | Positive | 1786617 - 1787054 | 15401.3 |
| rna polymerase sigma-b factor | SAMN05216266_104128 | Not Available | Positive | 1787051 - 1787842 | 29056.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
