Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216266_10469 | Not Available | Positive | 1727812 - 1728705 | 31032.4 |
| 5-deoxyglucuronate isomerase | SAMN05216266_10470 | Not Available | Positive | 1728698 - 1729567 | 31778.2 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase | SAMN05216266_10471 | Not Available | Positive | 1729564 - 1731402 | 65191.5 |
| transcriptional regulator, tetr family | SAMN05216266_10472 | Not Available | Positive | 1731486 - 1732100 | 21563.5 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05216266_10473 | Not Available | Negative | 1732110 - 1732745 | 21956.4 |
| benzaldehyde dehydrogenase (nad+) | SAMN05216266_10474 | Not Available | Negative | 1732813 - 1734273 | 50489.8 |
| mfs transporter, aahs family, benzoate transport protein | SAMN05216266_10475 | Not Available | Negative | 1734302 - 1735639 | 46987.4 |
| benzoylformate decarboxylase | SAMN05216266_10476 | Not Available | Negative | 1735655 - 1737241 | 54828.3 |
| transcriptional regulator, lysr family | SAMN05216266_10477 | Not Available | Positive | 1737356 - 1738261 | 33379.0 |
| hypothetical protein | SAMN05216266_10478 | Not Available | Positive | 1738469 - 1738618 | 5210.22 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
