Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase | SAMN05216266_103351 | Not Available | Negative | 1624277 - 1625212 | 34283.0 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN05216266_103352 | Not Available | Negative | 1625248 - 1626402 | 41275.8 |
| helix-turn-helix domain-containing protein | SAMN05216266_103353 | Not Available | Positive | 1626587 - 1627462 | 32207.0 |
| espg family protein | SAMN05216266_103354 | Not Available | Negative | 1627644 - 1628393 | 27467.4 |
| hypothetical protein | SAMN05216266_103355 | Not Available | Negative | 1628399 - 1629631 | 40897.4 |
| protein of unknown function | SAMN05216266_103356 | Not Available | Negative | 1629633 - 1630241 | 21067.4 |
| hypothetical protein | SAMN05216266_103357 | Not Available | Negative | 1630238 - 1630678 | 15585.1 |
| snoal-like domain-containing protein | SAMN05216266_103358 | Not Available | Negative | 1630951 - 1631463 | 18377.2 |
| transcriptional regulator, tetr family | SAMN05216266_103359 | Not Available | Negative | 1631460 - 1632080 | 23330.8 |
| l-2-hydroxyglutarate oxidase | SAMN05216266_103360 | Not Available | Positive | 1632146 - 1633324 | 42082.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
