Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted dehydrogenase | SAMN05216266_103331 | Not Available | Negative | 1602036 - 1603022 | 34984.9 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN05216266_103332 | Not Available | Negative | 1603025 - 1604116 | 38656.8 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05216266_103333 | Not Available | Positive | 1604398 - 1605918 | 53129.5 |
| hypothetical protein | SAMN05216266_103334 | Not Available | Positive | 1605946 - 1607091 | 41997.4 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN05216266_103335 | Not Available | Positive | 1607195 - 1609264 | 75484.3 |
| hypothetical protein | SAMN05216266_103336 | Not Available | Positive | 1609374 - 1611155 | 64659.7 |
| transferase hexapeptide (six repeat-containing protein) | SAMN05216266_103337 | Not Available | Negative | 1611172 - 1611759 | 20095.8 |
| nucleotide sugar dehydrogenase | SAMN05216266_103338 | Not Available | Negative | 1611851 - 1613140 | 46333.9 |
| udp-glucose 4-epimerase | SAMN05216266_103339 | Not Available | Positive | 1613609 - 1614571 | 33756.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05216266_103340 | Not Available | Positive | 1614698 - 1615378 | 24754.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
