Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excreted virulence factor espc, type vii esx diderm | SAMN05216266_103251 | Not Available | Negative | 1518901 - 1519212 | 11017.7 |
| hypothetical protein | SAMN05216266_103252 | Not Available | Positive | 1519336 - 1519872 | 19022.3 |
| hypothetical protein | SAMN05216266_103253 | Not Available | Negative | 1519887 - 1520117 | 8717.43 |
| s-adenosyl methyltransferase | SAMN05216266_103254 | Not Available | Negative | 1520209 - 1521042 | 30723.2 |
| hypothetical protein | SAMN05216266_103255 | Not Available | Negative | 1521222 - 1521488 | 8514.27 |
| Trna-arg | Not Available | Not Available | Positive | 1521841 - 1521913 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 1521970 - 1522059 | Not Available |
| acetoacetyl-coa synthetase | SAMN05216266_103258 | Not Available | Negative | 1522217 - 1524184 | 71315.5 |
| espg family protein | SAMN05216266_103259 | Not Available | Negative | 1524216 - 1524989 | 27167.6 |
| ppe family protein | SAMN05216266_103260 | Not Available | Negative | 1524990 - 1526081 | 37100.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
