Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyldiaminopimelate aminotransferase apoenzyme | SAMN05216266_103201 | Not Available | Positive | 1474559 - 1475728 | 41774.7 |
| rna polymerase sigma factor, sigma-70 family | SAMN05216266_103202 | Not Available | Negative | 1475768 - 1476325 | 20815.5 |
| hypothetical protein | SAMN05216266_103203 | Not Available | Positive | 1476691 - 1477917 | 40013.6 |
| transcriptional regulator, gntr family | SAMN05216266_103204 | Not Available | Negative | 1478347 - 1479762 | 49922.0 |
| uncharacterized membrane protein ycze | SAMN05216266_103205 | Not Available | Positive | 1479875 - 1480510 | 22250.9 |
| clp amino terminal domain-containing protein, pathogenicity island component | SAMN05216266_103206 | Not Available | Negative | 1480507 - 1481052 | 19734.8 |
| hth domain-containing protein | SAMN05216266_103207 | Not Available | Negative | 1481057 - 1481263 | 7614.14 |
| protein phosphatase 2c | SAMN05216266_103208 | Not Available | Positive | 1481329 - 1482096 | 27252.1 |
| protein of unknown function | SAMN05216266_103209 | Not Available | Positive | 1482288 - 1483013 | 25029.7 |
| amidase | SAMN05216266_103210 | Not Available | Positive | 1483173 - 1484546 | 48267.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
