Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c biogenesis protein | SAMN05216266_103131 | Not Available | Negative | 1411040 - 1412653 | 59413.1 |
| cytochrome c-type biogenesis protein | SAMN05216266_103132 | Not Available | Negative | 1412650 - 1413423 | 26788.5 |
| thiol-disulfide isomerase or thioredoxin | SAMN05216266_103133 | Not Available | Negative | 1413509 - 1414129 | 22405.5 |
| broad specificity phosphatase phoe | SAMN05216266_103134 | Not Available | Negative | 1414131 - 1414760 | 22936.2 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN05216266_103135 | Not Available | Negative | 1414757 - 1416061 | 45270.4 |
| dna-binding transcriptional regulator, merr family | SAMN05216266_103136 | Not Available | Negative | 1416144 - 1416968 | 30066.0 |
| helix-turn-helix domain-containing protein | SAMN05216266_103137 | Not Available | Negative | 1417030 - 1417458 | 15846.9 |
| hypothetical protein | SAMN05216266_103138 | Not Available | Negative | 1417434 - 1417889 | 16441.2 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05216266_103139 | Not Available | Positive | 1417962 - 1418849 | 32712.2 |
| hypothetical protein | SAMN05216266_103140 | Not Available | Negative | 1418877 - 1419242 | 12950.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
