Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| probable f420-dependent oxidoreductase, rv1855c family | SAMN05216266_10351 | Not Available | Positive | 1320514 - 1321392 | 32446.7 |
| protein of unknown function | SAMN05216266_10352 | Not Available | Positive | 1321461 - 1322672 | 43747.5 |
| gdp-mannose 6-dehydrogenase | SAMN05216266_10353 | Not Available | Positive | 1322716 - 1324062 | 47960.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05216266_10354 | Not Available | Positive | 1324076 - 1325428 | 49854.2 |
| capsular polysaccharide biosynthesis protein | SAMN05216266_10355 | Not Available | Positive | 1325558 - 1326934 | 47518.5 |
| chain length determinant protein | SAMN05216266_10356 | Not Available | Positive | 1326931 - 1328514 | 54828.4 |
| asparagine synthase (glutamine-hydrolysing) | SAMN05216266_10357 | Not Available | Positive | 1328552 - 1330474 | 70154.0 |
| predicted dehydrogenase | SAMN05216266_10358 | Not Available | Positive | 1330583 - 1332814 | 79069.4 |
| heparinase ii/iii n-terminus | SAMN05216266_10359 | Not Available | Positive | 1332811 - 1334820 | 73948.3 |
| right handed beta helix region | SAMN05216266_10360 | Not Available | Positive | 1334879 - 1336360 | 53009.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
