Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate permease | SAMN05216266_10331 | Not Available | Negative | 1303532 - 1304983 | 51257.7 |
| vanillate o-demethylase monooxygenase subunit | SAMN05216266_10332 | Not Available | Positive | 1305230 - 1306273 | 39115.0 |
| hypothetical protein | SAMN05216266_10333 | Not Available | Positive | 1306270 - 1306449 | 6732.98 |
| ferredoxin-nadp reductase | SAMN05216266_10334 | Not Available | Positive | 1306442 - 1307383 | 33673.1 |
| transcriptional regulator, iclr family | SAMN05216266_10335 | Not Available | Positive | 1307436 - 1308299 | 30407.8 |
| thioredoxin | SAMN05216266_10336 | Not Available | Negative | 1308309 - 1308680 | 13568.8 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05216266_10337 | Not Available | Negative | 1308716 - 1309012 | 10239.2 |
| putative abc transport system permease protein | SAMN05216266_10338 | Not Available | Positive | 1309374 - 1310192 | 28302.2 |
| hypothetical protein | SAMN05216266_10339 | Not Available | Negative | 1310265 - 1310531 | 9093.89 |
| multimeric flavodoxin wrba | SAMN05216266_10340 | Not Available | Positive | 1310559 - 1311176 | 22156.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
