Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, merr family | SAMN05216266_101116 | Not Available | Negative | 123625 - 124032 | 15352.3 |
| predicted arabinose efflux permease, mfs family | SAMN05216266_101117 | Not Available | Positive | 124098 - 125318 | 41870.2 |
| hypothetical protein | SAMN05216266_101118 | Not Available | Negative | 125526 - 125768 | 8395.91 |
| hypothetical protein | SAMN05216266_101119 | Not Available | Positive | 126328 - 126696 | 13927.8 |
| cold-shock dna-binding protein family | SAMN05216266_101120 | Not Available | Negative | 126772 - 126975 | 7461.7 |
| lipoprotein-anchoring transpeptidase erfk/srfk | SAMN05216266_101121 | Not Available | Positive | 127430 - 128689 | 45027.9 |
| mfs transporter, mhs family, proline/betaine transporter | SAMN05216266_101122 | Not Available | Positive | 128797 - 130209 | 49635.5 |
| acyl-coenzyme a thioesterase paai, contains hgg motif | SAMN05216266_101123 | Not Available | Positive | 130303 - 130851 | 19125.5 |
| hypothetical protein | SAMN05216266_101124 | Not Available | Positive | 130898 - 132073 | 42567.5 |
| serine/threonine-protein kinase pkng | SAMN05216266_101125 | Not Available | Negative | 132129 - 134606 | 88217.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
