Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN05216266_1031 | Not Available | Negative | 1277992 - 1278812 | 29812.3 |
| hypothetical protein | SAMN05216266_1032 | Not Available | Negative | 1278855 - 1278986 | 4847.87 |
| lsu ribosomal protein l12p | SAMN05216266_1033 | Not Available | Negative | 1279128 - 1279514 | 13455.1 |
| lsu ribosomal protein l10p | SAMN05216266_1034 | Not Available | Negative | 1279563 - 1280114 | 19246.9 |
| hypothetical protein | SAMN05216266_1035 | Not Available | Positive | 1280473 - 1281534 | 38169.6 |
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN05216266_1036 | Not Available | Negative | 1281648 - 1282418 | 26330.3 |
| large subunit ribosomal protein l1 | SAMN05216266_1037 | Not Available | Negative | 1282529 - 1283245 | 25412.8 |
| lsu ribosomal protein l11p | SAMN05216266_1038 | Not Available | Negative | 1283392 - 1283823 | 15226.5 |
| transcription antitermination protein nusg | SAMN05216266_1039 | Not Available | Negative | 1283901 - 1284770 | 30839.3 |
| preprotein translocase subunit sece | SAMN05216266_10310 | Not Available | Negative | 1284867 - 1285319 | 16255.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
