Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05216266_102324 | Not Available | Positive | 1181293 - 1182177 | 32224.7 |
| zinc carboxypeptidase | SAMN05216266_102325 | Not Available | Positive | 1182364 - 1183422 | 38371.0 |
| hypothetical protein | SAMN05216266_102326 | Not Available | Positive | 1183498 - 1183887 | 14150.3 |
| merr family transcriptional regulator, redox-sensitive transcriptional activator soxr | SAMN05216266_102327 | Not Available | Negative | 1183902 - 1184366 | 17453.0 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN05216266_102328 | Not Available | Positive | 1184545 - 1185411 | 30933.2 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05216266_102329 | Not Available | Positive | 1185456 - 1186289 | 30484.6 |
| prenyltransferase and squalene oxidase repeat-containing protein | SAMN05216266_102330 | Not Available | Positive | 1186495 - 1188147 | 58265.4 |
| hypothetical protein | SAMN05216266_102331 | Not Available | Positive | 1188141 - 1189388 | 45396.1 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN05216266_102332 | Not Available | Positive | 1189376 - 1190305 | 32221.4 |
| s-adenosyl methyltransferase | SAMN05216266_102333 | Not Available | Negative | 1190309 - 1191157 | 30383.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
