Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system permease protein | SAMN05216266_102284 | Not Available | Negative | 1144416 - 1145183 | 26210.9 |
| abc-2 type transport system atp-binding protein | SAMN05216266_102285 | Not Available | Negative | 1145180 - 1145908 | 25687.9 |
| transcriptional regulator, tetr family | SAMN05216266_102286 | Not Available | Negative | 1145901 - 1146455 | 19634.6 |
| helix-turn-helix domain-containing protein | SAMN05216266_102287 | Not Available | Negative | 1146514 - 1147587 | 39560.9 |
| cholesterol oxidase | SAMN05216266_102288 | Not Available | Positive | 1147598 - 1149418 | 66230.2 |
| hypothetical protein | SAMN05216266_102289 | Not Available | Positive | 1149483 - 1150718 | 43658.9 |
| ribosome-associated protein | SAMN05216266_102290 | Not Available | Positive | 1150726 - 1150947 | 7932.4 |
| dna-binding transcriptional activator of the sarp family | SAMN05216266_102291 | Not Available | Positive | 1151234 - 1154140 | 105528.0 |
| rare lipoprotein a (rlpa)-like double-psi beta-barrel | SAMN05216266_102292 | Not Available | Positive | 1154268 - 1154699 | 15159.8 |
| hypothetical protein | SAMN05216266_102293 | Not Available | Positive | 1154764 - 1155375 | 21723.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
