Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| precorrin-3b synthase | SAMN05216266_102274 | Not Available | Negative | 1130048 - 1131250 | 41419.3 |
| abc-2 type transport system atp-binding protein | SAMN05216266_102275 | Not Available | Positive | 1131352 - 1132317 | 35555.9 |
| abc-2 type transport system permease protein | SAMN05216266_102276 | Not Available | Positive | 1132314 - 1133165 | 30000.5 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN05216266_102277 | Not Available | Positive | 1133173 - 1133412 | 8954.76 |
| cobaltochelatase cobn subunit | SAMN05216266_102278 | Not Available | Positive | 1133695 - 1137315 | 130488.0 |
| dihydroxyacid dehydratase | SAMN05216266_102279 | Not Available | Negative | 1137801 - 1139474 | 58010.8 |
| uncharacterized protein | SAMN05216266_102280 | Not Available | Positive | 1139594 - 1142017 | 87616.1 |
| transcription elongation factor, grea/greb family | SAMN05216266_102281 | Not Available | Positive | 1142074 - 1142532 | 16474.2 |
| p-aminobenzoate n-oxygenase aurf | SAMN05216266_102282 | Not Available | Negative | 1142543 - 1143448 | 34166.1 |
| transcriptional regulator, tetr family | SAMN05216266_102283 | Not Available | Positive | 1143538 - 1144281 | 27253.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
