Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216266_102244 | Not Available | Positive | 1095489 - 1095716 | 7617.27 |
| cytochrome p450 | SAMN05216266_102245 | Not Available | Positive | 1095796 - 1097013 | 43731.4 |
| hypothetical protein | SAMN05216266_102246 | Not Available | Negative | 1097024 - 1097410 | 14124.2 |
| polyhydroxyalkanoate synthase | SAMN05216266_102247 | Not Available | Negative | 1097471 - 1098556 | 38852.8 |
| short-chain dehydrogenase | SAMN05216266_102248 | Not Available | Negative | 1098698 - 1099576 | 30509.8 |
| hygromycin-b 7''-o-kinase | SAMN05216266_102249 | Not Available | Positive | 1099763 - 1100668 | 33091.6 |
| 2-keto-4-pentenoate hydratase | SAMN05216266_102250 | Not Available | Positive | 1100737 - 1101534 | 27845.4 |
| 2-oxo-3-hexenedioate decarboxylase | SAMN05216266_102251 | Not Available | Positive | 1101531 - 1102043 | 17445.1 |
| glutamate synthase (nadph/nadh) large chain | SAMN05216266_102252 | Not Available | Positive | 1102649 - 1107202 | 165625.0 |
| glutamate synthase (nadph/nadh) small chain | SAMN05216266_102253 | Not Available | Positive | 1107195 - 1108646 | 52713.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
